emodelrunner.run_pairsim

Run pair simulation for synapse plasticity simulation.

Functions

run(config_path[, cvode_active, ...])

Run cell with pulse stimuli and pre-cell spike train.

emodelrunner.run_pairsim.run(config_path, cvode_active=True, postsyn_protocol_name='pulse', presyn_protocol_name='presyn_pulse', fixhp=True)[source]

Run cell with pulse stimuli and pre-cell spike train.

Parameters
  • config_path (str) – path to config file

  • cvode_active (bool) – whether to use variable time step

  • postsyn_protocol_name (str) – name of the postsynaptic protocol

  • presyn_protocol_name (str) – name of the presynaptic protocol

  • fixhp (bool) – to uninsert SK_E2 for hyperpolarization in cell model