emodelrunner.GUI_utils.interface¶

Main Interface.

Classes

GUI([fps, config_path])

GUI class.

class emodelrunner.GUI_utils.interface.GUI(fps=15, config_path='config/config_allsteps.ini')[source]¶

Bases: object

GUI class. Contains all frames and simulation.

simulation¶

contains BluePyOpt simulation (and cell) data

Type:: NeuronSimulation

play¶

if True, runs the simulation

Type:: bool

refresh_display_dt¶

timestep (s) for the display of figures

Type:: float

plot_3d¶

set to True to plot the cell shapes in 3D

Type:: bool

toolbar_on¶

set to True to display the matplotlib toolbars

Type:: bool

figsize¶

figures size. can be “small”, “medium”, or “large”.

Type:: str

root¶

root of the GUI

Type:: tk.Tk

style¶

style of the tkinter objects

Type:: ttk.Style

frames¶

main frames embedded in root

Type:: dict of ttk.Frames

reload¶

if True, the simulation has to be reloaded

Type:: bool

check_v_change()[source]¶

Checks the voltage change in the cell sections.

Update display if change is significant.

Returns:: True if the cell morphology with color-coded voltage figure has been updated
Return type:: bool

clear_voltage_figure()[source]¶: Clear the voltage figure.

config_has_changed()[source]¶: Stop the simulation when the user has changed configuration.

continue_simul()[source]¶: Unpause the simulation.

create_frames()[source]¶: Creates the frames.

end_simul()[source]¶: End the simulation.

static get_refresh_from_fps(fps)[source]¶

Get refresh rate from fps.

Parameters:: fps (float) – number of frames per second to be displayed
Returns:: refresh time (s)
Return type:: float

pause()[source]¶: Pause the simulation.

reload_figure_frame()[source]¶: Reload figure frame.

reload_params()[source]¶: Reload cell, protocol, simulation, figure frame.

run_simul(check_dt=1.5)[source]¶

Main loop for running simulation.

Parameters:: check_dt (float) – check for significant voltage change every check_dt (ms) (simulation time)

start()[source]¶: Start the simulation from beginning. Reload simulation config if needed.

update_figures()[source]¶: Update the figures.